Evaluation of Noninvasive Biospecimens for Transcriptome Studies

    Molly Martorella, Silva Kasela, Renee Garcia-Flores, Alper Gokden, Stephane E. Castel, Tuuli Lappalainen
    TLDR Hair follicles and urine cell pellets are promising for transcriptome studies due to consistent quality and useful expression profiles.
    This study evaluated noninvasive biospecimens for transcriptome studies, focusing on buccal swabs, hair follicles, saliva, and urine cell pellets collected from 19 individuals over multiple timepoints, resulting in 300 unique samples and 472 transcriptomes. Hair follicles and urine cell pellets were identified as the most promising due to their consistent sample quality and relevant expression profiles. The research demonstrated the feasibility of using noninvasive tissues in various transcriptomic applications, suggesting that these biospecimens could enhance disease-relevant discoveries and clinical applications by enabling more complex study designs and increasing sample sizes.
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